Best Shopify Accounting Apps for 2024

Synchronize all sales, fees, inventory, tax, refunds, and more to QuickBooks/Xero automatically

Synder offers hourly synchronization of your Shopify store’s sales, fees, taxes, discounts, gift cards, shipping, items, and customers, as well as POS transactions with Xero/QuickBooks. With Synder, you can simplify the reconciliation process, benefit from unlimited historical imports, enjoy multi-currency support, and sync inventory and COGS to your books. Trusted by Shopify merchants and accounting professionals, Synder saves time on bookkeeping, accurately tracks taxes, and improves financial visibility.

• Auto-sync Shopify sales, fees, inventory, taxes, and more to QuickBooks or Xero
• Import daily summarized entries or each individual sale by selecting the sync mode
• Simplify reconciliation and access detailed P&L reports with automated bookkeeping
• Find accounting professionals specializing in Shopify in the Synder Directory
• Automate every channel you sell on under one roof – Synder supports 25+ platforms

Save Time and Money with Webgility’s Data Syncing for QuickBooks Desktop

Webgility Desktop is the leading ecommerce accounting and inventory automation software designed specifically for QuickBooks Desktop. Our innovative solutions are designed to help you streamline your business operations, saving you valuable time and money by reducing the need for manual data entry. With Webgility, you can effortlessly manage and synchronize orders, inventory, pricing, product listings, purchase workflows, and 3PL/dropshipping tasks across all of your sales channels and QuickBooks, ensuring the accuracy of your financial records.

• Effortlessly manage and automate product listings, pricing, inventory, and orders
• Gain a comprehensive 360-degree view of profitability and performance with AI-backed forecasts
• Easily scale your business with features and plans that support your growth
• Automatically sync your multi-channel sales and financial data to QuickBooks
• Simplify sales tax filing by automatically recording multi-store sales tax

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Effortlessly Support Causes You Care About and Boost Your Business with Pledge

With Pledge’s award-winning app, you can easily add the option for customers to donate to verified nonprofits from around the world. In just minutes, you can build brand loyalty and improve your business by offering various ways to give back, such as round-up at checkout and product proceeds. Pledge also provides clear donation tracking, reporting, and disbursement, ensuring transparency and accountability.

Shopify and Shopify Plus Merchants, as well as some of the world’s largest brands and nonprofits, can trust Pledge to ensure the safety and security of donations.

• Select your preferred charity and choose how you want to give back, all within minutes.
• Boost customer loyalty and increase overall Lifetime Value (LTV) and Average Order Value (AOV).
• Save time and resources with automated tax receipts and donation processing.
• Showcase your impact with our real-time impact calculator.
• Access transparent and comprehensive reporting all in one place.

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Streamline Your Ecommerce Business Finances with Xero Integration

By connecting your Xero account, you can effortlessly manage your ecommerce business finances. Our seamless integration ensures that a daily summary of your Shopify sales is automatically synced with Xero at the end of each day. This provides you with an accurate view of your cash flow and business performance, while also allowing you to reconcile your payouts in a timely manner.

• Timely Payout Reconciliation: Our integration syncs your Shopify sales to Xero on a daily basis, ensuring that you can reconcile your payouts without any delays.
• Daily Summary Invoice: We create a daily summary invoice for your preferred payment gateways, making it easier for you to manage your finances.
• Tax Rate Grouping: Our integration groups your Shopify sales based on tax rates, simplifying your sales tax management.
• Comprehensive Sales Insights: Our integration displays sales, discounts, shipping, refunds, gift card transactions, and fees across invoices, providing you with a holistic view of your business finances.

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Pay any business, anywhere, any way you want.

Shopify Bill Pay, powered by Melio, offers a comprehensive business payments solution. With this platform, you can easily schedule, pay, and manage all your business payments. Whether you prefer to pay from your Shopify Balance account, debit/credit card, or ACH bank transfer, you can do so, even if vendors don’t accept that form of payment. Rest assured, they will receive their payment through a check or bank transfer.

• Upload, manually add, or forward bills from your email to populate your account.
• Sort, filter, and schedule upcoming payments from one dedicated dashboard.
• Sync to QuickBooks Online and bring all your finances to one platform.

Sync Payouts into QuickBooks Online for Simplified Accounting

Streamline your accounting processes by seamlessly connecting your Shopify store with QuickBooks. With this integration, you can automate the tracking of your payouts, ensuring accurate and efficient record-keeping. By splitting your payouts into sales receipts, refund receipts, and expenses, you can easily monitor your sales, refunds, and fees. QuickBooks allows you to import up to 12 months of historical data from Shopify Payouts, eliminating the need for manual data entry and saving you valuable time.

One of the key benefits of syncing your payouts with QuickBooks is the automatic categorization of your transactions. Your payouts will be categorized by sales, shipping, discounts, tax, and fees, making it easy to analyze your Profit & Loss statement or Balance Sheet. This categorization feature ensures that you have a clear overview of your financials and allows you to make informed business decisions.

• Connect your Shopify account to QuickBooks in just a few simple steps and effortlessly import your Payouts.
• Enjoy the convenience of automatic categorization for your Payouts, including sales, refunds, and fees.
• Access summarized sales receipts, refund receipts, and expense transactions for a comprehensive view of your financials.
• Stay on top of your cash flow and gain a better understanding of your revenue by channel.

By syncing your payouts into QuickBooks Online, you can optimize your accounting processes, save time, and gain valuable insights into your business’s financial performance.